BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G03SP1|AL426411
(770 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig982 668 0.0
3x_Contig154 253 5e-67
>3x_Contig982
Length = 3343
Score = 668 bits (336), Expect = 0.0
Identities = 347/352 (98%), Gaps = 1/352 (0%)
Strand = Plus / Minus
Query: 2 gctatcgaagagamcgaggagattaatgccactggtgataaatgtttgaagtacgtaggt 61
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gctatcgaagagaccgaggagattaatgccactggtgataaatgtttgaagtacgtaggt 295
Query: 62 ggccaaatgagtgtwgaaatggaaattccaaagatcaaatggttgaaaaacaacattccg 121
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ggccaaatgagtgttgaaatggaaattccaaagatcaaatggttgaaaaacaacattccg 235
Query: 122 gagaagaagtttgctcagtgcaaatwcttcgatttggctgactacttaactttcaaagct 181
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 234 gagaagaagtttgctcagtgcaaattcttcgatttggctgactacttaactttcaaagct 175
Query: 182 accgggtcagagatcagatcctactgttctaccgtttgtaagcaaggtctattgccactt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 accgggtcagagatcagatcctactgttctaccgtttgtaagcaaggtctattgccactt 115
Query: 242 ggagtagaaggatctaagaacggttggtctaaagagttcttacaagaaataggattggaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ggagtagaaggatctaagaacggttggtctaaagagttcttacaagaaataggattggaa 55
Query: 302 gagttgattgcagatgattttgccaagcttggtggttcavtaacagaaacca 353
||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 54 gagttgattgcagatgattttgccaagcttggtgg-tcagtaacagaaacca 4
>3x_Contig154
Length = 778
Score = 253 bits (127), Expect = 5e-67
Identities = 127/127 (100%)
Strand = Plus / Minus
Query: 644 tacagagatgttatggctcctgggttttggttagctgagggtggtcaatcatgcacaggt 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tacagagatgttatggctcctgggttttggttagctgagggtggtcaatcatgcacaggt 719
Query: 704 gcattattagcccacgttttaactacccatccagcatacgccgagctttctcaactttca 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gcattattagcccacgttttaactacccatccagcatacgccgagctttctcaactttca 659
Query: 764 gatgcag 770
|||||||
Sbjct: 658 gatgcag 652
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4352
Number of Sequences: 1807
Number of extensions: 4352
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 2
length of query: 770
length of database: 10,358,551
effective HSP length: 16
effective length of query: 754
effective length of database: 10,329,639
effective search space: 7788547806
effective search space used: 7788547806
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)